Unfortunately, it sounds like one of the main devs who worked on the topological naming problem has passed away. This is some meaningful work to leave behind.
That is actually true for all CAD software. Some mitigate the issue better than others, however you can trigger TNP even in the $10,000 commercial software. The FreeCAD team has been careful to point this out. Although I would agree that the solution implemented is not as robust as the commercial equivalents, it is actually fairly close.